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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944194.1_cds_XP_016487123.1_77894
CDS Infomation

[gene=LOC107807280] [db_xref=GeneID:107807280] [protein=DNA-directed RNA polymerase III subunit RPC5-like isoform X2] [protein_id=XP_016487123.1] [location=join(5561..5935,6029..6097,6224..6331,6883..6957,7457..7621,8065..8100,8367..8473,8627..8698,9158..9206,9341..9933,10752..10857)] [gbkey=CDS]
Sequence

ATGGCGGAGATGGATTTGGACTTCGACGGCCCAAGTAAAGCTCCGACTAGGCCATCCCGT
TTTGCTCCCAAAAGCTCTAAATTGAAGCCCCAACCCCAACCAGTAACCAAACCCAAACCT
GAAACACCGTCATCATCATCTGATCCTCCTATTCCGACTAAAAAGGAAGAATTAGTTTCA
AAACCCTCAGTAAAAGACCATCCAGCCGAAAATGGAGCCGCAATGGGTAAAGATGACGTT
CCATTGGATGAAAACACTACGGGAGACGACATGGCAGAAGAAGAACAAATCGCCATGGAT
ACTGATAGCGTTGAAGATGAAGTTGTTCGTGAAATTGATGTGTGTTTTACCCCTTCCTCT
GATCCTGACAATCAGCTATATGTGTTCCAGTATCCATTGAGGCCCGTATGGCGTCCCTAT
GAATTGGAGGAAAGATGTCAAGAGGTGAGATTGAGACCTTCAACTGCACAAATGGAGGTT
GATTTGGCAATAGATTTTGATTCTAAAAATTTTGACCGAGACTCTGTTCATGCAGTAAAG
ATGGAAAAGCAGACTCTTTCTACATCATGGATGCCATTATCAACTTGCACCTCTGGATAT
GCTGTTGGGGTCCTCATTGGTGATGAGTTACACCTCAATCCTATTCATGCAGTTGTACAG
CTCCGACCATCACAGCAGCATCTTAAGGAAAGTGAGTTGAAGAAGAAGAACATTGCCACC
AGCAGTGATGGAAAAACTGTTGAAAAGAAAGATGTCGAGGAAAAAAAGCCTGCGGGTCCA
TCAAAGAAGCAGAACAAACCACCTGGGAATGACAAGGATATTGAAGAGCATTGGGTACAT
CTAAAATACCATGGAGCTAGGAGTGACATTTCAGCCAGATATCTACAGGAAATGGCCATG
GAGGAAGGCTCTCCAGTACCATTTTCAATGAGCCCGGTTGATTATCTGAATGCTGTATGT
CCTGGCAGACCAACTGACACTGACAGATTAAAAATTCTTCGAACAAGGTTGTCTCAATTA
CCTCTTGAAGAACGCATTAGAACTTGGCTTCTTGAGGGACCTCCAATTCATCGTTTTGAT
GCTCTAAAGCACCTGGCGCTGGATGATCCTGTTGATGAAATTTTGAGAGTCCTCCAAAGA
TACGCACAATTAGTTCAAGGATTATGGGTTCCAAAAAGTTCATTAATCTATGGAAAGAAT
GATGGACTTGAAGTTTTAGCAAGGAATTTTATTCTCTTTGAGTTTAGCAAGAGTACCATT
ATTAAGCAGAAAGTTTTTTCCAGGAGGTTGGATTTCCTTAAAGCTGCGAAACCAACACTA
AAATCATTAGCTGTTGAGAGGCCTGACCTGAATGATTGGAAGCTCAAAGAGCATCCTGAC
AAGAAATTTGAAGTTCTTTATGGTGATGTTGTGAAAGAGCAGCAAGCTACCTGGGAATGC
ATGGGGAAACAGATCAATGGTATTTTGTCTGGAGGAAGAAACAGGCCTGCTCTGAAGAAT
CCTTTAAATTCAAATGACAACATTCCTGCACTGCCCGGTGGTGGTACACCCGCTCCTGGG
TCACTTTTGCGAACATCTATGTCAGAAAAAACTCGAGAAGCTTTACCAAAGGCGCTTCAA
AAAGTTTTTAGAATCTATAAGGCTTGCAGATCGGAAATCCATTGTTTAATTTTTCCAGTT
TCCAGCAAATCCGCCAACGTCTGCGAGATGTGGCAGTTTCTGAGTCTCAAAAGGGAGATG
CAAAGAAGGCTATAA

Peptide Sequence

PEP ID

XP_016487123.1
PEP Infomation

PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform X2 [Nicotiana tabacum]
Sequence

MAEMDLDFDGPSKAPTRPSRFAPKSSKLKPQPQPVTKPKPETPSSSSDPPIPTKKEELVS
KPSVKDHPAENGAAMGKDDVPLDENTTGDDMAEEEQIAMDTDSVEDEVVREIDVCFTPSS
DPDNQLYVFQYPLRPVWRPYELEERCQEVRLRPSTAQMEVDLAIDFDSKNFDRDSVHAVK
MEKQTLSTSWMPLSTCTSGYAVGVLIGDELHLNPIHAVVQLRPSQQHLKESELKKKNIAT
SSDGKTVEKKDVEEKKPAGPSKKQNKPPGNDKDIEEHWVHLKYHGARSDISARYLQEMAM
EEGSPVPFSMSPVDYLNAVCPGRPTDTDRLKILRTRLSQLPLEERIRTWLLEGPPIHRFD
ALKHLALDDPVDEILRVLQRYAQLVQGLWVPKSSLIYGKNDGLEVLARNFILFEFSKSTI
IKQKVFSRRLDFLKAAKPTLKSLAVERPDLNDWKLKEHPDKKFEVLYGDVVKEQQATWEC
MGKQINGILSGGRNRPALKNPLNSNDNIPALPGGGTPAPGSLLRTSMSEKTREALPKALQ
KVFRIYKACRSEIHCLIFPVSSKSANVCEMWQFLSLKREMQRRL

Transcript Sequence

Gene sequence data has not been registered.